BioSQL

[edit] 1 Getting the code

Download BioSQL code:

svn co svn://code.open-bio.org/biosql/biosql-schema/trunk biosql-schema

Install bioperl-db:

svn co svn://code.open-bio.org/bioperl/bioperl-db/trunk bioperl-db

[edit] 2 PostgreSQL

Create the database:

createdb sequences

Set up the schema in the database:

psql sequences < sql/biosqldb-pg.sql

[edit] 3 Other notes

• BioSQL Project Wiki
  • Schema Overview
• Mining GenBank Entries using BioSQL and GBrowse
• INSTALL notes