DARWIN

DARWIN -- Data Analysis and Retrieval With Indexed Nucleotide/peptide sequences

Programming environment for sequence analysis

[edit] 1 Command line flags

-l Specifies the location of the Darwin library
-s Specifies that Darwin should be run in server mode.
-q Specifies that Darwin should be run in quiet mode.
-U  ?
-i [input_file] Load a code file
-o [output_file]

[edit] 2 Issues

  • No good way to read in standard files, like an EMBOSS matrix or 20x20 tab delineated matrix
  • Can't print out numbers to more than 5 significant digits
  • Haven't found a way to use command line arguments with a script
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