Thesis notes
[edit] 1 Data
- Alignment data
- PAM250 extrapolations
- Influence and scaling
- Jackknifes
- Low counted substitutions
- Log odds matrices
- Crossovers
- Amino acid compositions
- Lost disordered families
[edit] 2 Code and methods
- Working with amino acid compositions in R
- Working with substitution matrices in R
- Using SQLite in R
- Printing tables in R